Select: WindowJmol1ProteinRYMV_SobemoV_Q709L01ra6A1u09AType.1d.d3.RMSD_1ra6A.d3.RMSD_1u09APositionPos1Pos2Pos3Pos4Pos5Pos6Pos7Pos8Pos9Pos10Pos11Pos12Pos13Pos14Pos15Pos16Pos17Pos18Pos19Pos20Pos21Pos22Pos23Pos24Pos25Pos26Pos27Pos28Pos29Pos30Pos31Pos32Pos33Pos34Pos35Pos36Pos37Pos38Pos39Pos40Pos41Pos42Pos43Pos44Pos45Pos46Pos47Pos48Pos49Pos50Pos51Pos52Pos53Pos54Pos55Pos56Pos57Pos58Pos59Pos60Pos61Pos62Pos63Pos64Pos65Pos66Pos67Pos68Pos69Pos70Pos71Pos72Pos73Pos74Pos75Pos76Pos77Pos78Pos79Pos80Pos81Pos82Pos83Pos84Pos85Pos86Pos87Pos88Pos89Pos90Pos91Pos92Pos93Pos94Pos95Pos96Pos97Pos98Pos99Pos100Pos101Pos102Pos103Pos104Pos105Pos106Pos107Pos108Pos109Pos110Pos111Pos112Pos113Pos114Pos115Pos116Pos117Pos118Pos119Pos120Pos121Pos122Pos123Pos124Pos125Pos126Pos127Pos128Pos129Pos130Pos131Pos132Pos133Pos134Pos135Pos136Pos137Pos138Pos139Pos140Pos141Pos142Pos143Pos144Pos145Pos146Pos147Pos148Pos149Pos150Pos151Pos152Pos153Pos154Pos155Pos156Pos157Pos158Pos159Pos160Pos161Pos162Pos163Pos164Pos165Pos166Pos167Pos168Pos169Pos170Pos171Pos172Pos173Pos174Pos175Pos176Pos177Pos178Pos179Pos180Pos181Pos182Pos183Pos184Pos185Pos186Pos187Pos188Pos189Pos190Pos191Pos192Pos193Pos194Pos195Pos196Pos197Pos198Pos199Pos200Pos201Pos202Pos203Pos204Pos205Pos206Pos207Pos208Pos209Pos210Pos211Pos212Pos213Pos214Pos215Pos216Pos217Pos218Pos219Pos220Pos221Pos222Pos223Pos224Pos225Pos226Pos227Pos228Pos229Pos230Pos231Pos232Pos233Pos234Pos235Pos236Pos237Pos238Pos239Pos240Pos241Pos242Pos243Pos244Pos245Pos246Pos247Pos248Pos249Pos250Pos251Pos252Pos253Pos254Pos255Pos256Pos257Pos258Pos259Pos260Pos261Pos262Pos263Pos264Pos265Pos266Pos267Pos268Pos269Pos270Pos271Pos272Pos273Pos274Pos275Pos276Pos277Pos278Pos279Pos280Pos281Pos282Pos283Pos284Pos285Pos286Pos287Pos288Pos289Pos290Pos291Pos292Pos293Pos294Pos295Pos296Pos297Pos298Pos299Pos300Pos301Pos302Pos303Pos304Pos305Pos306Pos307Pos308Pos309Pos310Pos311Pos312Pos313Pos314Pos315Pos316Pos317Pos318Pos319Pos320Pos321Pos322Pos323Pos324Pos325Pos326Pos327Pos328Pos329Pos330Pos331Pos332Pos333Pos334Pos335Pos336Pos337Pos338Pos339Pos340Pos341Pos342Pos343Pos344Pos345Pos346Pos347Pos348Pos349Pos350Pos351Pos352Pos353Pos354Pos355Pos356Pos357Pos358Pos359Pos360Pos361Pos362Pos363Pos364Pos365Pos366Pos367Pos368Pos369Pos370Pos371Pos372Pos373Pos374Pos375Pos376Pos377Pos378Pos379Pos380Pos381Pos382Pos383Pos384Pos385Pos386Pos387Pos388Pos389Pos390Pos391Pos392Pos393Pos394Pos395Pos396Pos397Pos398Pos399Pos400Pos401Pos402Pos403Pos404Pos405Pos406Pos407Pos408Pos409Pos410Pos411Pos412Pos413Pos414Pos415Pos416Pos417Pos418Pos419Pos420Pos421Pos422Pos423Pos424Pos425Pos426Pos427Pos428Pos429Pos430Pos431Pos432Pos433Pos434Pos435Pos436Pos437Pos438Pos439Pos440Pos441Pos442Pos443Pos444Pos445Pos446Pos447Pos448Pos449Pos450Pos451Pos452Pos453Pos454Pos455Pos456Pos457Pos458Pos459Pos460Pos461Pos462Pos463Pos464Pos465Pos466Pos467Pos468Pos469Pos470Pos471Pos472Pos473Pos474Pos475Pos476Pos477Pos478Pos479Pos480Pos481Pos482Pos483Pos484Pos485Pos486Pos487Pos488Pos489Pos490Pos491Pos492Pos493Pos494Pos495Pos496Pos497Pos498Pos499Pos500Pos501Pos502Pos503Pos504Pos505Pos506Pos507Pos508Pos509Pos510Pos511Pos512Pos513Pos514Pos515Pos516Pos517Pos518Pos519Pos520Pos521Pos522Pos523Pos524Pos525Pos526Pos527Pos528Pos529Pos530Pos531Pos532Pos533Pos534Pos535Pos536Pos537Pos538Pos539Pos540Pos541Pos542Pos543Pos544Pos545Pos546Pos547Pos548Pos549Pos550Pos551Pos552Pos553Pos554Pos555Pos556Pos557Pos558Pos559Pos560ResidueLigandsALAARGASNASPCYSGLNGLUGLYHISILELYSLEUMETPHEPROSERTHRVALTRPTYRAtommainsideN-mainO-mainC-mainN-sideO-sideC-sideCCACBCDCECGCHCZHNDNHNENZOOGODOESGContact1.0Ang1.2Ang1.4Ang1.6Ang1.8Ang2.0Ang2.2Ang2.4Ang2.6Ang2.8Ang3.0Ang3.2Ang3.4Ang3.6Ang3.8Ang4.0Ang4.2Ang4.4Ang4.6Ang4.8Ang5.0Ang5.2Ang5.4Ang5.6Ang5.8Ang6.0Ang6.2Ang6.4Ang6.6Ang6.8Ang7.0Ang7.2Ang7.4Ang7.6Ang7.8Ang8.0Ang8.2Ang8.4Ang8.6Ang8.8Ang9.0Ang9.2Ang9.4Ang9.6Ang9.8Ang10.0Ang
Display: ActionColorWireframeSpacefillCartoonTraceLabelWireframe0.000.050.100.150.200.250.300.400.500.600.700.800.901.001.502.002.503.003.504.004.505.005.506.006.507.007.508.008.509.009.5010.00Spacefill0.000.050.100.150.200.250.300.400.500.600.700.800.901.001.502.002.503.003.504.004.505.005.506.006.507.007.508.008.509.009.5010.00Dots0.000.050.100.150.200.250.300.400.500.600.700.800.901.001.502.002.503.003.504.004.505.005.506.006.507.007.508.008.509.009.5010.00Cartoon0.000.050.100.150.200.250.300.400.500.600.700.800.901.001.502.002.503.003.504.004.505.005.506.006.507.007.508.008.509.009.5010.00Trace0.000.050.100.150.200.250.300.400.500.600.700.800.901.001.502.002.503.003.504.004.505.005.506.006.507.007.508.008.509.009.5010.00ColorValueCPKGroupMonomerChainsAminoShapelyStructureTemperatureHbond energyHbond typeRedBlueGreenYellowOrangeCyanMagentaGreyPinkWhiteBlackLabelPositionValuePos:ValHideAllWireframeSpacefillDotsCartoonTraceColorLabelHbondSync





Structures:


 RYMV_SobemoV_Q709L0
 1ra6A
 1u09A




Display
Backbone Trace
Backbone Cartoon
Sidechains
Trace + Interface
Trace + PPI
All atoms
Van der Waals



Color
Rainbow
Polarity + Charge
Secondary structure
CPK
Chains






 Spin


Save as:
 FASTA 
 NHX 
  PNG  

Click-and-drag structure for manual rotation

Shift-double click-and-drag for manual shift

Drag mouse over aligned sequences to highlight structure residues

Click any identifier in the top right panel to project sequence
colors on structure

To download a pdb file, click on the structure identifier in the
bottom right panel

Right-click structure for more commands